Publications - All




 
2021
Jiang X, Nelson AE, Cleveland RJ, Beavers DP, Schwartz TA, Arbeeva L, Alvarez C, Callahan LF, Messier S, Loeser R, Kosorok MR. "A precision medicine approach to develop and internally validate optimal exercise and weight loss treatments for overweight and obese adults with knee osteoarthritis." Arthritis Care Res (Hoboken). 2021;73(5):693-701. PubMed
Luckett DJ, Laber EB, El-Kamary SS, Fan C, Jhaveri R, Perou CM, Shebl FM, Kosorok MR. "Receiver operating characteristic curves and confidence bands for support vector machines." Biometrics. 2021;77(4):1422-1430. PubMed
Wang X, Piantadosi S, Le-Rademacher J, Mandrekar SJ. "Statistical considerations for subgroup analyses." J Thorac Oncol. 2021;16(3):375-380. PubMed
Yu J, Zhou H, Cai J. "Accelerated failure time model for data from outcome-dependent sampling." Lifetime Data Anal. 2021;27(1):15-37. PubMed
2020
Bhattacharya A, García-Closas M, Olshan AF, Perou CM, Troester MA, Love MI. "A framework for transcriptome-wide association studies in breast cancer in diverse study populations." Genome Biol. 2020;21(1):42. PubMed
Brucker A, Lu W, West RMarceau, Yu QY, Hsiao CKate, Hsiao TH, Lin CH, Magnusson PKE, Sullivan PF, Szatkiewicz JP, Lu TP, Tzeng JY. "Association test using Copy Number Profile Curves (CONCUR) enhances power in rare copy number variant analysis." PLoS Comput Biol. 2020;16(5):e1007797. PubMed
Cao X, Ganti AKishor, Stinchcombe T, Wong ML, Ho JC, Shen C, Liu Y, Crawford J, Pang H, Wang X. "Predicting risk of chemotherapy-induced severe neutropenia: A pooled analysis in individual patients data with advanced lung cancer." Lung Cancer. 2020;141:14-20. PubMed
Chen Q, Zhang F, Chen MH, Cong XJulie. "Estimation of treatment effects and model diagnostics with two-way time-varying treatment switching: an application to a head and neck study." Lifetime Data Anal. 2020;26(4):685-707. PubMed
Chua KC, Xiong C, Ho C, Mushiroda T, Jiang C, Mulkey F, Lai D, Schneider BP, Rashkin SR, Witte JS, Friedman PN, Ratain MJ, McLeod HL, Rugo HS, Shulman LN, Kubo M, Owzar K, Kroetz DL. "Genomewide meta-analysis validates a role for S1PR1 in microtubule targeting agent-induced sensory peripheral neuropathy." Clin Pharmacol Ther. 2020;108(3):625-634. PubMed
Cruz-Garcia L, O'Brien G, Sipos B, Mayes S, Love MI, Turner DJ, Badie C. "Generation of a transcriptional radiation exposure signature in human blood using long-read nanopore sequencing." Radiat Res. 2020;193(2):143-154. PubMed
DE Castro M, Chen MH, Zhang Y, D'Amico AV. "A Bayesian multi-risks survival (MRS) model in the presence of double censorings." Biometrics. 2020;76(4):1297-1309. PubMed
Deng Q, Zhang YY, Roy D, Chen MH. "Superiority of combining two independent trials in interim futility analysis." Stat Methods Med Res. 2020;29(2):522-540. PubMed
Dong L, Laber E, Goldberg Y, Song R, Yang S. "Ascertaining properties of weighting in the estimation of optimal treatment regimes under monotone missingness." Stat Med. 2020;39(25):3503-3520. PubMed
Guan Q, Reich BJ, Laber EB, Bandyopadhyay D. "Bayesian nonparametric policy search with application to periodontal recall intervals." J Am Stat Assoc. 2020;115(531):1066-1078. PubMed
Gwon Y, Mo M, Chen MH, Chi Z, Li J, Xia AH, Ibrahim JG. "Network meta-regression for ordinal outcomes: Applications in comparing Crohn's disease treatments." Stat Med. 2020. PubMed
Helgeson ES, Liu Q, Chen G, Kosorok MR, Bair E. "Biclustering via sparse clustering." Biometrics. 2020;76(1):348-358. PubMed
Huang J, Sachdeva M, Xu E, Robinson TJ, Luo L, Ma Y, Williams NT, Lopez O, Cervia LD, Yuan F, Qin X, Zhang D, Owzar K, Gokgoz N, Seto A, Okada T, Singer S, Andrulis IL, Wunder JS, Lazar AJ, Rubin BP, Pipho K, Mello SS, Giudice J, Kirsch DG. "The long noncoding RNA promotes sarcoma metastasis by regulating RNA splicing pathways." Mol Cancer Res. 2020;18(10):1534-1544. PubMed
Jeng J, Rhyne J, Zhang T, Tzeng JY. "Effective SNP ranking improves the performance of eQTL mapping." Genet Epidemiol. 2020;44(6):611-619. PubMed
Li X, Ivanova A, Tian H, Lim P, Liu K. "Continual reassessment method with regularization in phase I clinical trials." J Biopharm Stat. 2020;30(6):964-978. PubMed
Li J, Jung SH. "Sample size calculation for cluster randomization trials with a time-to-event endpoint." Stat Med. 2020;39(25):3608-3623. PubMed
Li F, Allen AS. "Secondary analysis of case-control association studies: Insights on weighting-based inference motivate a new specification test." Stat Med. 2020;39(22):2869-2882. PubMed
Lin DY, Zeng D, Couper D. "A general framework for integrative analysis of incomplete multiomics data." Genet Epidemiol. 2020;44(7):646-664. PubMed
Love MI, Soneson C, Hickey PF, Johnson LK, Pierce T, Shepherd L, Morgan M, Patro R. "Tximeta: Reference sequence checksums for provenance identification in RNA-seq." PLoS Comput Biol. 2020;16(2):e1007664. PubMed
Luckett DJ, Laber EB, Kahkoska AR, Maahs DM, Mayer-Davis E, Kosorok MR. " Estimating dynamic treatment regimes in mobile health using V-learning." J Am Stat Assoc. 2020;115(530):692-706. PubMed
Maitra P, Amorim LDAF, Cai J. "Multiplicative rates model for recurrent events in case-cohort studies." Lifetime Data Anal. 2020;26(1):134-157. PubMed
Martinez K, Maity A, Yolken RH, Sullivan PF, Tzeng JY. "Robust kernel association testing (RobKAT)." Genet Epidemiol. 2020;44(3):272-282. PubMed
McCabe SD, Lin DY, Love MI. "Consistency and overfitting of multi-omics methods on experimental data." Brief Bioinform. 2020;21(4):1277-1284. PubMed
Nguyen CT, Luckett DJ, Kahkoska AR, Shearrer GE, Spruijt-Metz D, Davis JN, Kosorok MR. "Estimating individualized treatment regimes from crossover designs." Biometrics. 2020;76(3):778-788. PubMed
Psioda MA, Hu K, Zhang Y, Pan J, Ibrahim JG. "Bayesian design of biosimilars clinical programs involving multiple therapeutic indications." Biometrics. 2020;76(2):630-642. PubMed
Rashid NU, Li Q, Yeh JJen, Ibrahim JG. "Modeling between-study heterogeneity for improved replicability in gene signature selection and clinical prediction." J Am Stat Assoc. 2020;115(531):1125-1138. PubMed
Rashid NU, Peng XL, Jin C, Moffitt RA, Volmar KE, Belt BA, Panni RZ, Nywening TM, Herrera SG, Moore KJ, Hennessey SG, Morrison AB, Kawalerski R, Nayyar A, Chang AE, Schmidt B, Kim HJin, Linehan DC, Yeh JJen. "Purity independent subtyping of tumors (PurIST), a clinically robust, single-sample classifier for tumor subtyping in pancreatic cancer." Clin Cancer Res. 2020;26(1):82-92. PubMed
Secord AAlvarez, Burdett KBell, Owzar K, Tritchler D, Sibley AB, Liu Y, Starr MD, Brady C, Lankes HA, Hurwitz HI, Mannel RS, Tewari KS, O'Malley DM, Gray H, Bakkum-Gamez JN, Fujiwara K, Boente M, Deng W, Burger RA, Birrer MJ, Nixon AB. "Predictive blood-based biomarkers in patients with epithelial ovarian cancer treated with carboplatin and paclitaxel with or without bevacizumab: Results from GOG-0218." Clin Cancer Res. 2020;26(6):1288-1296. PubMed
Shi C, Lu W, Song R. "A sparse random projection-based test for overall qualitative treatment effects." J Am Stat Assoc. 2020;115(531):1201-1213. PubMed
Srivastava A, Malik L, Sarkar H, Zakeri M, Almodaresi F, Soneson C, Love MI, Kingsford C, Patro R. "Alignment and mapping methodology influence transcript abundance estimation." Genome Biol. 2020;21(1):239. PubMed
Staicu AM, Islam MNazmul, Dumitru R, van Heugten E. "Longitudinal dynamic functional regression." J R Stat Soc Ser C Appl Stat. 2020;69(1):25-46. PubMed
Wang F, Schilsky RL, Page D, Califf RM, Cheung K, Wang X, Pang H. "Development and validation of a natural language processing tool to generate the CONSORT reporting checklist for randomized clinical trials." JAMA Netw Open. 2020;3(10):e2014661. PubMed
Wang YB, Chen MH, Shi W, Lewis P, Kuo L. "Inflated density ratio and its variation and generalization for computing marginal likelihoods." J Korean Stat Soc. 2020;49(1):244-263. PubMed
Wang R, Lin DY, Jiang Y. "SCOPE: A normalization and copy-number estimation method for single-cell DNA sequencing." Cell Syst. 2020;10(5):445-452.e6. PubMed
Wisdom AJ, Mowery YM, Hong CS, Himes JE, Nabet BY, Qin X, Zhang D, Chen L, Fradin H, Patel R, Bassil AM, Muise ES, King DA, Xu ES, Carpenter DJ, Kent CL, Smythe KS, Williams NT, Luo L, Ma Y, Alizadeh AA, Owzar K, Diehn M, Bradley T, Kirsch DG. "Single cell analysis reveals distinct immune landscapes in transplant and primary sarcomas that determine response or resistance to immunotherapy." Nat Commun. 2020;11(1):6410. PubMed
Wu Y, Wang X, Lin J, Jia B, Owzar K. "Predictive accuracy of markers or risk scores for interval censored survival data." Stat Med. 2020;39(18):2437-2446. PubMed
Yan KK, Wang X, Lam WWT, Vardhanabhuti V, Lee AWM, Pang HH. "Radiomics analysis using stability selection supervised component analysis for right-censored survival data." Comput Biol Med. 2020;124:103959. PubMed
Yang S, Ding P. "Combining multiple observational data sources to estimate causal effects." J Am Stat Assoc. 2020;115(531):1540-1554. PubMed
Yang S, Kim JKwang, Song R. "Doubly robust inference when combining probability and non-probability samples with high dimensional data." J R Stat Soc Series B Stat Methodol. 2020;82(2):445-465. PubMed
Yang S, Pieper K, Cools F. "Semiparametric estimation of structural failure time models in continuous-time processes." Biometrika. 2020;107(1):123-136. PubMed
Zhou F, Zhou H, Li T, Zhu H. "Analysis of secondary phenotypes in multigroup association studies." Biometrics. 2020;76(2):606-618. PubMed
Zhou Q, Cai J, Zhou H. "Semiparametric inference for a two-stage outcome-dependent sampling design with interval-censored failure time data." Lifetime Data Anal. 2020;26(1):85-108. PubMed
2019
Baldoni PL, Rashid NU, Ibrahim JG. "Improved detection of epigenomic marks with mixed effects hidden Markov models." Biometrics. 2019;75(4):1401-1413. PubMed
Bayar MAmine, Ivanova A, Le Teuff G. "CRM2DIM: A SAS macro for implementing the dual-agent Bayesian continual reassessment method." Comput Methods Programs Biomed. 2019;176:211-223. PubMed
Bellach A, Kosorok MR, Rüschendorf L, Fine JP. "Weighted NPMLE for the subdistribution of a competing risk." J Am Stat Assoc. 2019;114(525):259-270. PubMed
Brownstein NC, Cai J. "Tests of trend between disease outcomes and ordinal covariates discretized from underlying continuous variables: simulation studies and applications to NHANES 2007-2008." BMC Med Res Methodol. 2019;19(1):2. PubMed
Chen ST, Xiao L, Staicu AM. "A smoothing-based goodness-of-fit test of covariance for functional data." Biometrics. 2019;75(2):562-571. PubMed
Dasgupta S, Goldberg Y, Kosorok MR. "Feature elimination in kernel machines in moderately high dimensions." Ann Stat. 2019;47(1):497-526. PubMed
Diao G, Liu GF, Zeng D, Wang W, Tan X, Heyse JF, Ibrahim JG. "Efficient methods for signal detection from correlated adverse events in clinical trials." Biometrics. 2019;75(3):1000-1008. PubMed
Ganti AKishor, Wang X, Stinchcombe TE, Wang Y, Bradley J, Cohen HJ, Kelly K, Paulus R, Ramalingam SS, Vokes EE, Pang H. "Clinical prognostic model for older patients with advanced non-small cell lung cancer." J Geriatr Oncol. 2019;10(4):555-559. PubMed
Gao H, Kelsey CR, Boyle J, Xie T, Catalano S, Wang X, Yin FF. "Impact of esophageal motion on dosimetry and toxicity with thoracic radiation therapy." Technol Cancer Res Treat. 2019;18:1533033819849073. PubMed
Gao F, Zeng D, Couper D, Lin DY. "Semiparametric regression analysis of multiple right- and interval-censored events." J Am Stat Assoc. 2019;114(527):1232-1240. PubMed
Griffin L, Lee D, Jaisle A, Carek P, George T, Laber E, Lok B, Modave F, Paskett E, Krieger J. "Creating an mHealth App for Colorectal Cancer Screening: User-Centered Design Approach." JMIR Hum Factors. 2019;6(2):e12700. PubMed
Hamy AS, Tury S, Wang X, Gao J, Pierga JY, Giacchetti S, Brain E, Pistilli B, Marty M, Espié M, Benchimol G, Laas E, Laé M, Asselain B, Aouchiche B, Edelman M, Reyal F. "Celecoxib with neoadjuvant chemotherapy for breast cancer might worsen outcomes differentially by COX-2 expression and ER status: Exploratory analysis of the REMAGUS02 trial." J Clin Oncol. 2019;37(8):624-635. PubMed
Hu W, Laber EB, Barker C, Stefanski LA. "Assessing tuning parameter selection variability in penalized regression." Technometrics. 2019;61(2):154-164. PubMed
Ibrahim JG, Kim S, Chen MH, Shah AK, Lin J. "Bayesian multivariate skew meta-regression models for individual patient data." Stat Methods Med Res. 2019;28(10-11):3415-3436. PubMed
Jeng J, Zhang T, Tzeng JY. "Efficient signal inclusion with genomic applications" J Am Stat Assoc. 2019;114(528):1787-1799. PubMed
Jiang B, Song R, Li J, Zeng D. "Entropy learning for dynamic treatment regimes." Stat Sin. 2019;29(4):1633-1655. PubMed
Joshi N, Fine J, Chu R, Ivanova A. "Estimating the subgroup and testing for treatment effect in a post-hoc analysis of a clinical trial with a biomarker." J Biopharm Stat. 2019;29(4):685-695. PubMed
Jung SH, Chi SAh, Ahn HJoo. "K-Sample comparisons using propensity analysis." Biom J. 2019;61(3):698-713. PubMed
Kosorok MR, Laber EB. "Precision medicine." Annu Rev Stat Appl. 2019;6:263-286. PubMed
Lachos VH, Matos LA, Castro LM, Chen MH. "Flexible longitudinal linear mixed models for multiple censored responses data." Stat Med. 2019;38(6):1074-1102. PubMed
Li H, Chen MH, Ibrahim JG, Kim S, Shah AK, Lin J, Tershakovec AM. "Bayesian inference for network meta-regression using multivariate random effects with applications to cholesterol lowering drugs." Biostatistics. 2019;20(3):499-516. PubMed
Li Z, Lin J, Sibley AB, Truong T, Chua KC, Jiang Y, McCarthy J, Kroetz DL, Allen A, Owzar K. "Efficient estimation of grouped survival models." BMC Bioinformatics. 2019;20(1):269. PubMed
Li W, Liu W, Kakoki A, Wang R, Adebali O, Jiang Y, Sancar A. "Nucleotide excision repair capacity increases during differentiation of human embryonic carcinoma cells into neurons and muscle cells." J Biol Chem. 2019;294(15):5914-5922. PubMed
Lin DY. "A simple and accurate method to determine genomewide significance for association tests in sequencing studies." Genet Epidemiol. 2019;43(4):365-372. PubMed
Lin J, Sibley A, Shterev I, Nixon A, Innocenti F, Chan C, Owzar K. "fastJT: An R package for robust and efficient feature selection for machine learning and genome-wide association studies." BMC Bioinformatics. 2019;20(1):333. PubMed
Little P, Lin DY, Sun W. "Associating somatic mutations to clinical outcomes: a pan-cancer study of survival time." Genome Med. 2019;11(1):37. PubMed
Liu Y, Hu G, Cao L, Wang X, Chen MH. "A comparison of Monte Carlo methods for computing marginal likelihoods of item response theory models." J Korean Stat Soc. 2019;48(4):503-512. PubMed
Liu J, Sun W, Liu Y. "Joint skeleton estimation of multiple directed acyclic graphs for heterogeneous population." Biometrics. 2019;75(1):36-47. PubMed
Liu Y, Ma X, Zhang D, Geng L, Wang X, Zheng W, Chen MH. "Look before you leap: Systematic evaluation of tree-based statistical methods in subgroup identification." J Biopharm Stat. 2019;29(6):1082-1102. PubMed
Luo S, Song R, Styner M, Gilmore JH, Zhu H. "FSEM: Functional structural equation models for twin functional data." J Am Stat Assoc. 2019;114(525):344-357. PubMed
Neupane S, Fučíková K, Lewis LA, Kuo L, Chen MH, Lewis PO. "Assessing combinability of phylogenomic data using Bayes factors." Syst Biol. 2019;68(5):744-754. PubMed
Olby NJ, Lim JH, Wagner N, Zidan N, Early PJ, Mariani CL, Muñana KR, Laber E. "Time course and prognostic value of serum GFAP, pNFH, and S100β concentrations in dogs with complete spinal cord injury because of intervertebral disc extrusion." J Vet Intern Med. 2019;33(2):726-734. PubMed
Psioda MA, Ibrahim JG. "Bayesian clinical trial design using historical data that inform the treatment effect." Biostatistics. 2019;20(3):400-415. PubMed
Ruppert AS, Yin J, Davidian M, Tsiatis AA, Byrd JC, Woyach JA, Mandrekar SJ. "Application of a sequential multiple assignment randomized trial (SMART) design in older patients with chronic lymphocytic leukemia." Ann Oncol. 2019;30(4):542-550. PubMed
Schild SE, Fan W, Stinchcombe TE, Vokes EE, Ramalingam SS, Bradley JD, Kelly K, Pang HH, Wang X. "Toxicity related to radiotherapy dose and targeting strategy: A pooled analysis of cooperative group trials of combined modality therapy for locally advanced non-small cell lung cancer." J Thorac Oncol. 2019;14(2):298-303. PubMed
Shi C, Lu W, Song R. "Determining the number of latent factors in statistical multi-relational learning. " J Mach Learn Res. 2019;20. PubMed
Shi C, Song R, Chen Z, Li R. "Linear hypothesis testing for high dimensional generalized linear models." Ann Stat. 2019;47(5):2671-2703. PubMed
Shi C, Song R, Lu W. "On testing conditional qualitative treatment effects." Ann Stat. 2019;47(4):2348-2377. PubMed
Soneson C, Love MI, Patro R, Hussain S, Malhotra D, Robinson MD. "A junction coverage compatibility score to quantify the reliability of transcript abundance estimates and annotation catalogs." Life Sci Alliance. 2019;2(1). PubMed
Stinchcombe TE, Jänne PA, Wang X, Bertino EM, Weiss J, Bazhenova L, Gu L, Lau C, Paweletz C, Jaslowski A, Gerstner GJ, Baggstrom MQ, Graziano S, Bearden J, Vokes EE. "Effect of Erlotinib plus Bevacizumab vs Erlotinib alone on progression-free survival in patients with advanced EGFR-mutant non–small cell lung cancer: A phase 2 randomized clinical trial. " JAMA Oncol. 2019;5(10):1448-1455. PubMed
Su L, Lu W, Song R. "Modelling and estimation for optimal treatment decision with interference." Stat (Int Stat Inst). 2019;8(1). PubMed
Tsiatis AA, Davidian M, Holloway ST, Laber EB. "Dynamic Treatment Regimes: Statistical Methods for Precision Medicine 2019:602.
Wang YB, Chen MH, Kuo L, Lewis PO. "Partition weighted approach for estimating the marginal posterior density with applications." J Comput Graph Stat. 2019;28(2):334-349. PubMed
West RMarceau, Lu W, Rotroff DM, Kuenemann MA, Chang SM, Wu MC, Wagner MJ, Buse JB, Motsinger-Reif AA, Fourches D, Tzeng JY. "Identifying individual risk rare variants using protein structure guided local tests (POINT)." PLoS Comput Biol. 2019;15(2):e1006722. PubMed
Williams LA, Hoadley KA, Nichols HB, Geradts J, Perou CM, Love MI, Olshan AF, Troester MA. "Differences in race, molecular and tumor characteristics among women diagnosed with invasive ductal and lobular breast carcinomas." Cancer Causes Control. 2019;30(1):31-39. PubMed
Wojcik GL, Graff M, Nishimura KK, Tao R, Haessler J, Gignoux CR, Highland HM, Patel YM, Sorokin EP, Avery CL, Belbin GM, Bien SA, Cheng I, Cullina S, Hodonsky CJ, Hu Y, Huckins LM, Jeff J, Justice AE, Kocarnik JM, Lim U, Lin BM, Lu Y, Nelson SC, Park SSL, Poisner H, Preuss MH, Richard MA, Schurmann C, Setiawan VW, Sockell A, Vahi K, Verbanck M, Vishnu A, Walker RW, Young KL, Zubair N, Acuña-Alonso V, Ambite JLuis, Barnes KC, Boerwinkle E, Bottinger EP, Bustamante CD, Caberto C, Canizales-Quinteros S, Conomos MP, Deelman E, Do R, Doheny K, Fernández-Rhodes L, Fornage M, Hailu B, Heiss G, Henn BM, Hindorff LA, Jackson RD, Laurie CA, Laurie CC, Li Y, Lin DY, Moreno-Estrada A, Nadkarni G, Norman PJ, Pooler LC, Reiner AP, Romm J, Sabatti C, Sandoval K, Sheng X, Stahl EA, Stram DO, Thornton TA, Wassel CL, Wilkens LR, Winkler CA, Yoneyama S, Buyske S, Haiman CA, Kooperberg C, Le Marchand L, Loos RJF, Matise TC, North KE, Peters U, Kenny EE, Carlson CS. "Genetic analyses of diverse populations improves discovery for complex traits." Nature. 2019;570(7762):514-518. PubMed
Wong KYau, Fan C, Tanioka M, Parker JS, Nobel AB, Zeng D, Lin DY, Perou CM. "I-Boost: An integrative boosting approach for predicting survival time with multiple genomics platforms." Genome Biol. 2019;20(1):52. PubMed
Wong KYau, Zeng D, Lin DY. "Robust score tests with missing data in genomics studies" J Am Stat Assoc. 2019;114(528):1778-1786. PubMed
Wu J, Chen MH, Schifano ED, Ibrahim JG, Fisher JD. "A new Bayesian joint model for longitudinal count data with many zeros, intermittent missingness, and dropout with applications to HIV prevention trials." Stat Med. 2019;38(30):5565-5586. PubMed
Wu Y, Chambers CD, Xu R. "Semiparametric sieve maximum likelihood estimation under cure model with partly interval censored and left truncated data for application to spontaneous abortion." Lifetime Data Anal. 2019;25(3):507-528. PubMed
Xiao W, Zhang HH, Lu W. "Robust regression for optimal individualized treatment rules." Stat Med. 2019;38(11):2059-2073. PubMed
Xue X, Foster MC, Ivanova A. "Rapid enrollment design for finding the optimal dose in immunotherapy trials with ordered groups." J Biopharm Stat. 2019;29(4):625-634. PubMed
Yang HC, Hu G, Chen MH. "Bayesian variable selection for Pareto regression models with latent multivariate log Gamma process with applications to earthquake magnitudes" Geosciences (Basel). 2019;9(4). PubMed
Yang Y, Huh R, Culpepper HW, Lin Y, Love MI, Li Y. "SAFE-clustering: Single-cell Aggregated (From Ensemble) clustering for single-cell RNA-seq data." Bioinformatics. 2019;35(8):1269-1277. PubMed
Yang Y, Hu J, Selby CP, Li W, Yimit A, Jiang Y, Sancar A. "Single-nucleotide resolution analysis of nucleotide excision repair of ribosomal DNA in humans and mice." J Biol Chem. 2019;294(1):210-217. PubMed
Yazdani A, Yazdani A, Elsea SH, Schaid DJ, Kosorok MR, Dangol G, Samiei A. "Genome analysis and pleiotropy assessment using causal networks with loss of function mutation and metabolomics." BMC Genomics. 2019;20(1):395. PubMed
Yimit A, Adebali O, Sancar A, Jiang Y. "Differential damage and repair of DNA-adducts induced by anti-cancer drug cisplatin across mouse organs." Nat Commun. 2019;10(1):309. PubMed
Zhang J, Liang W, Liang H, Wang X, He J. "Endpoint surrogacy in oncological randomized controlled trials with immunotherapies: a systematic review of trial-level and arm-level meta-analyses." Ann Transl Med. 2019;7(11):244. PubMed
Zhao YQ, Laber EB, Ning Y, Saha S, Sands BE. "Efficient augmentation and relaxation learning for individualized treatment rules using observational data." J Mach Learn Res. 2019;20. PubMed
Zhou J, Zhang J, Mclain AC, Lu W, Sui X, Hardin JW. "A varying-coefficient generalized odds rate model with time-varying exposure: An application to fitness and cardiovascular disease mortality." Biometrics. 2019;75(3):853-863. PubMed
Zhu A, Ibrahim JG, Love MI. "Heavy-tailed prior distributions for sequence count data: removing the noise and preserving large differences." Bioinformatics. 2019;35(12):2084-2092. PubMed
Zhu W, Zeng D, Song R. "Proper inference for value function in high-dimensional Q-learning for dynamic treatment regimes." J Am Stat Assoc. 2019;114(527):1404-1417. PubMed
2018
Burbank AJ, Todoric K, Steele P, Rosen J, Zhou H, Frye M, Loughlin CE, Ivins S, Mills K, Massey LDembnicki, Reeve BB, Hernandez ML. "Age and African-American race impact the validity and reliability of the asthma control test in persistent asthmatics." Respir Res. 2018;19(1):152. PubMed
Butler EL, Laber EB, Davis SM, Kosorok MR. "Incorporating patient preferences into estimation of optimal individualized treatment rules." Biometrics. 2018;74(1):18-26. PubMed
Chen K, Mishra N, Smyth J, Bar H, Schifano E, Kuo L, Chen MH. "A tailored multivariate mixture model for detecting proteins of concordant change among virulent strains of Clostridium Perfringens." J Am Stat Assoc. 2018;113(522):546-559. PubMed
Chen J, Zhang C, Kosorok MR, Liu Y. "Double sparsity kernel learning with automatic variable selection and data extraction." Stat Interface. 2018;11(3):401-420. PubMed
Chen J, Fu H, He X, Kosorok MR, Liu Y. "Estimating individualized treatment rules for ordinal treatments." Biometrics. 2018;74(3):924-933. PubMed
Chen X, Cai J. "Reweighted estimators for additive hazard model with censoring indicators missing at random." Lifetime Data Anal. 2018;24(2):224-249. PubMed
Choi J, Zeng D, Olshan AF, Cai J. "Joint modeling of survival time and longitudinal outcomes with flexible random effects." Lifetime Data Anal. 2018;24(1):126-152. PubMed
Chung Y, Ivanova A, Hudgens MG, Fine JP. "Partial likelihood estimation of isotonic proportional hazards models." Biometrika. 2018;105(1):133-148. PubMed
Davenport CA, Maity A, Sullivan PF, Tzeng JY. "A powerful test for SNP effects on multivariate binary outcomes using kernel machine regression." Stat Biosci. 2018;10(1):117-138. PubMed
Diao G, Dong J, Zeng D, Ke C, Rong A, Ibrahim JG. "Biomarker threshold adaptive designs for survival endpoints." J Biopharm Stat. 2018;28(6):1038-1054. PubMed
Fu S, Zhang S, Liu Y. "Adaptively weighted large margin angle-based classifiers." J Multivar Anal. 2018;166:282-299. PubMed
Gao F, Zeng D, Wei H, Wang X, Ibrahim JG. "Estimating Treatment Effects for recurrent events in the presence of rescue medications: An application to the Immune Thrombocytopenia Study." Stat Biosci. 2018;10(2):473-489. PubMed
Gao F, Zeng D, Lin DY. "Semiparametric regression analysis of interval-censored data with informative dropout." Biometrics. 2018;74(4):1213-1222. PubMed
Gong S, Zhang K, Liu Y. "Efficient test-based variable selection for high-dimensional linear models." J Multivar Anal. 2018;166:17-31. PubMed
Hager R, Tsiatis AA, Davidian M. "Optimal two-stage dynamic treatment regimes from a classification perspective with censored survival data." Biometrics. 2018;74(4):1180-1192. PubMed
Hao B, Sun WWei, Liu Y, Cheng G. "Simultaneous clustering and estimation of heterogeneous graphical models." J Mach Learn Res. 2018;18. PubMed
Hibbard JC, Friedstat JS, Thomas SM, Edkins RE, Hultman S, Kosorok MR. "LIBERTI: A SMART study in plastic surgery." Clin Trials. 2018;15(3):286-293. PubMed
Hidalgo SJTeran, Wu MC, Engel SM, Kosorok MR. "Goodness-of-fit test for nonparametric regression models: Smoothing spline ANOVA models as example." Comput Stat Data Anal. 2018;122:135-155. PubMed
Innocenti F, Jiang C, Sibley AB, Etheridge AS, Hatch AJ, Denning S, Niedzwiecki D, Shterev ID, Lin J, Furukawa Y, Kubo M, Kindler HL, Auman T, Venook AP, Hurwitz HI, McLeod HL, Ratain MJ, Gordân R, Nixon AB, Owzar K. "Genetic variation determines VEGF-A plasma levels in cancer patients." Sci Rep. 2018;8(1):16332. PubMed
Isogai Y, Wu Z, Love MI, Ahn MHoYoung, Bambah-Mukku D, Hua V, Farrell K, Dulac C. "Multisensory logic of infant-directed aggression by males. " Cell. 2018;175(7):1827-1841.e17. PubMed
Jeng J, Lu W, Peng H. "High-dimensional inference for personalized treatment decision." Electron J Stat. 2018;12(1):2074-2089. PubMed
Jiang Y, Wang R, Urrutia E, Anastopoulos IN, Nathanson KL, Zhang NR. "CODEX2: Full-spectrum copy number variation detection by high-throughput DNA sequencing." Genome Biol. 2018;19(1):202. PubMed
Jung SH. "Phase II cancer clinical trials for biomarker-guided treatments." J Biopharm Stat. 2018;28(2):256-263. PubMed
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2014
An B, Guo J, Liu Y. "Hypothesis testing for band size detection of high-dimensional banded precision matrices." Biometrika. 2014;101(2):477-483. PubMed
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Chen MH, Ibrahim JG, Zeng D, Hu K, Jia C. "Bayesian design of superiority clinical trials for recurrent events data with applications to bleeding and transfusion events in myelodyplastic syndrome." Biometrics. 2014;70(4):1003-13. PubMed
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2013
Appell ML, Berg J, Duley J, Evans WE, Kennedy MA, Lennard L, Marinaki T, McLeod HL, Relling MV, Schaeffeler E, Schwab M, Weinshilboum R, Yeoh AEJ, McDonagh EM, Hebert JM, Klein TE, Coulthard SA. "Nomenclature for alleles of the thiopurine methyltransferase gene." Pharmacogenet Genomics. 2013;23(4):242-8. PubMed
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Cao H, Sun W, Kosorok MR. "The optimal power puzzle: Scrutiny of the monotone likelihood ratio assumption in multiple testing." Biometrika. 2013;100(2):495-502. PubMed
Caron WP, Lay JC, Fong AM, La-Beck NM, Kumar P, Newman SE, Zhou H, Monaco JH, Clarke-Pearson DL, Brewster WR, Van Le L, Bae-Jump VL, Gehrig PA, Zamboni WC. "Translational studies of phenotypic probes for the mononuclear phagocyte system and liposomal pharmacology." J Pharmacol Exp Ther. 2013;347(3):599-606. PubMed
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Chen Y, Luo S, Chu H, Wei P. "Bayesian inference on risk differences: an application to multivariate meta-analysis of adverse events in clinical trials." Stat Biopharm Res. 2013;5(2):142-155. PubMed
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Lin DY, Zeng D, Tang ZZ. "Quantitative trait analysis in sequencing studies under trait-dependent sampling." Proc Natl Acad Sci U S A. 2013;110(30):12247-52. PubMed
Lin CY, Bondell H, Zhang HHelen, Zou H. "Variable selection for nonparametric quantile regression via smoothing spline ANOVA." Stat. 2013;2(1):255-268. PubMed
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McClure RK, Styner M, Maltbie E, Lieberman JA, Gouttard S, Gerig G, Shi X, Zhu H. "Localized differences in caudate and hippocampal shape are associated with schizophrenia but not antipsychotic type." Psychiatry Res. 2013;211(1):1-10. PubMed
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Mentz RJ, Schulte PJ, Fleg JL, Fiuzat M, Kraus WE, Piña IL, Keteyian SJ, Kitzman DW, Whellan DJ, Ellis SJ, O'Connor CM. "Clinical characteristics, response to exercise training, and outcomes in patients with heart failure and chronic obstructive pulmonary disease: findings from Heart Failure and A Controlled Trial Investigating Outcomes of Exercise TraiNing (HF-ACTION)." Am Heart J. 2013;165(2):193-9. PubMed
Miranda MF, Zhu H, Ibrahim JG. "Bayesian spatial transformation models with applications in neuroimaging data." Biometrics. 2013;69(4):1074-83. PubMed
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Reich BJ, Bandyopadhyay D, Bondell HD. "A nonparametric spatial model for periodontal data with non-random missingness." J Am Stat Assoc. 2013;108(503). PubMed
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2012
Ahn M, Zhang HHelen, Lu W. "Moment-based method for random effects selection in linear mixed models." Stat Sin. 2012;22(4):1539-1562. PubMed
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Li Y, Gilmore JH, Wang J, Styner M, Lin W, Zhu H. "TwinMARM: Two-stage multiscale adaptive regression methods for twin neuroimaging data." IEEE Trans Med Imaging. 2012;31(5):1100-12. PubMed
Liu Y, Yuan Z, Cai J, Zhou H. "Marginal hazard regression for correlated failure time data with auxiliary covariates." Lifetime Data Anal. 2012;18(1):116-38. PubMed
Ma GJulie, Chi E, Ibrahim JG, Parker RA. "Assessing Similarity to Existing Drugs to Decide Whether to Continue Drug Development." Stat Biopharm Res. 2012;4(3):293-300. PubMed
Maity A, Sullivan PF, Tzeng JY. "Multivariate phenotype association analysis by marker-set kernel machine regression." Genet Epidemiol. 2012;36(7):686-95. PubMed
Meyer AM, Carpenter WR, Abernethy AP, Stürmer T, Kosorok MR. "Data for cancer comparative effectiveness research: past, present, and future potential." Cancer. 2012;118(21):5186-97. PubMed
Owzar K, Li Z, Cox N, Jung SH. "Power and sample size calculations for SNP association studies with censored time-to-event outcomes." Genet Epidemiol. 2012;36(6):538-48. PubMed
Pang H, George SL, Hui K, Tong T. "Gene selection using iterative feature elimination random forests for survival outcomes." IEEE/ACM Trans Comput Biol Bioinform. 2012;9(5):1422-31. PubMed
Sanoff HK, Carpenter WR, Martin CF, Sargent DJ, Meyerhardt JA, Stürmer T, Fine JP, Weeks J, Niland J, Kahn KL, Schymura MJ, Schrag D. "Comparative effectiveness of oxaliplatin vs non-oxaliplatin-containing adjuvant chemotherapy for stage III colon cancer." J Natl Cancer Inst. 2012;104(3):211-27. PubMed
Shi X, Zhu H, Ibrahim JG, Liang F, Lieberman J, Styner M. "Intrinsic regression models for medial representation of subcortical structures." J Am Stat Assoc. 2012;107(497):12-23. PubMed
Skup M, Zhu H, Zhang H. "Multiscale adaptive marginal analysis of longitudinal neuroimaging data with time-varying covariates." Biometrics. 2012;68(4):1083-92. PubMed
Vock DM, Davidian M, Tsiatis AA, Muir AJ. "Mixed model analysis of censored longitudinal data with flexible random-effects density." Biostatistics. 2012;13(1):61-73. PubMed
Wang J, Shen H, Zhu H. "Discussion of the paper "Clustering random curves under spatial interdependence with application to service accessibility" by Jiang and Serban." Technometrics. 2012;54(2):129-133. PubMed
Wang X, Ma J, George S, Zhou H. "Estimation of AUC or Partial AUC under test-result-dependent sampling." Stat Biopharm Res. 2012;4(4):313-323. PubMed
Wang SY, Chu H, Shamliyan T, Jalal H, Kuntz KM, Kane RL, Virnig BA. "Network meta-analysis of margin threshold for women with ductal carcinoma in situ." J Natl Cancer Inst. 2012;104(7):507-16. PubMed
Yuan Y, Zhu H, Lin W, Marron JS. "Local polynomial regression for symmetric positive definite matrices." J R Stat Soc Series B Stat Methodol. 2012;74(4):697-719. PubMed
Yuan S, Zhang HHelen, Davidian M. "Variable selection for covariate-adjusted semiparametric inference in randomized clinical trials." Stat Med. 2012;31(29):3789-804. PubMed
Zeng D, Chen Q, Chen MH, Ibrahim JG. "Estimating treatment effects with treatment switching via semicompeting risks models: an application to a colorectal cancer study." Biometrika. 2012;99(1):167-184. PubMed
Zhang B, Tsiatis AA, Laber EB, Davidian M. "A robust method for estimating optimal treatment regimes." Biometrics. 2012;68(4):1010-8. PubMed
Zhang B, Tsiatis AA, Davidian M, Zhang M, Laber E. "Estimating optimal treatment regimes from a classification perspective." Stat. 2012;1(1):103-114. PubMed
Zhang X, Huang S, Sun W, Wang W. "Rapid and robust resampling-based multiple-testing correction with application in a genome-wide expression quantitative trait loci study." Genetics. 2012;190(4):1511-20. PubMed
Zhao Y, Zeng D, Rush J, Kosorok MR. "Estimating individualized treatment rules using outcome weighted learning." J Am Stat Assoc. 2012;107(449):1106-1118. PubMed
Zhu H, Ibrahim JG, Cho H, Tang N. "Bayesian case influence measures for statistical models with missing data." J Comput Graph Stat. 2012;21(1):253-271. PubMed
Zhu H, Ibrahim JG, Chi YY, Tang N. "Bayesian influence measures for joint models for longitudinal and survival data." Biometrics. 2012;68(3):954-64. PubMed
Zhu H, Li R, Kong L. "Multivariate varying coefficient model for functional responses." Ann Stat. 2012;40(5):2634-2666. PubMed
Zhu H, Ibrahim JG, Cho H. "Perturbation and scaled Cook's distance." Ann Stat. 2012;40(2):785-811. PubMed
Zhu R, Kosorok MR. "Recursively imputed survival trees." J Am Stat Assoc. 2012;107(497):331-340. PubMed
Zhu R, Zeng D, Kosorok MR. "Reinforcement learning trees" UNC at Chapel Hill. 2012.
2011
Amorim LDAF, Cai J, Zeng D. "Proportional rate models for recurrent time event data under dependent censoring: A comparative study. 2011;4:123-141.
Boos DD, Stefanski LA. "P-value precision and reproducibility." Am Stat. 2011;65(4):213-221. PubMed
Cai J, Zeng D. "Additive mixed effect model for clustered failure time data." Biometrics. 2011;67(4):1340-51. PubMed
Cao H, Kosorok MR. "Simultaneous critical values for t-tests in very high dimensions." Bernoulli (Andover). 2011;17(1):347-394. PubMed
Chen MH, Ibrahim JG, Lam P, Yu A, Zhang Y. "Bayesian design of noninferiority trials for medical devices using historical data." Biometrics. 2011;67(3):1163-70. PubMed
Chen Y, An H, Zhu H, Jewells V, Armao D, Shen D, Gilmore JH, Lin W. "Longitudinal regression analysis of spatial-temporal growth patterns of geometrical diffusion measures in early postnatal brain development with diffusion tensor imaging." Neuroimage. 2011;58(4):993-1005. PubMed
Chen LM, Ibrahim JG, Chu H. "Sample size and power determination in joint modeling of longitudinal and survival data." Stat Med. 2011;30(18):2295-309. PubMed
Chow SM, Tang N, Yuan Y, Song X, Zhu H. "Bayesian estimation of semiparametric nonlinear dynamic factor analysis models using the Dirichlet process prior." Br J Math Stat Psychol. 2011;64(Pt 1):69-106. PubMed
Crews HB, Boos DD, Stefanski LA. "FSR methods for second-order regression models." Comput Stat Data Anal. 2011;55(6):2026-2037. PubMed
Goldberg Y, Kosorok MR. "Comment on "Adaptive confidence intervals for the test error in classification"" J Am Stat Assoc. 2011;106(495):920-924. PubMed
He Q, Lin DY. "A variable selection method for genome-wide association studies." Bioinformatics. 2011;27(1):1-8. PubMed
Ibrahim JG, Zhu H, Garcia RI, Guo R. "Fixed and random effects selection in mixed effects models." Biometrics. 2011;67(2):495-503. PubMed
Lee MH, Tzeng JY, Huang SY, Hsiao CKate. "Combining an evolution-guided clustering algorithm and haplotype-based LRT in family association studies." BMC Genet. 2011;12:48. PubMed
Li J, Fine JP. "Assessing the dependence of sensitivity and specificity on prevalence in meta-analysis." Biostatistics. 2011;12(4):710-22. PubMed
Li Y, Zhu H, Shen D, Lin W, Gilmore JH, Ibrahim JG. "Multiscale adaptive regression models for neuroimaging data." J R Stat Soc Series B Stat Methodol. 2011;73(4):559-578. PubMed
Lin DY, Tang ZZ. "A general framework for detecting disease associations with rare variants in sequencing studies." Am J Hum Genet. 2011;89(3):354-67. PubMed
Liu Y, Zhang HHelen, Wu Y. "Hard or soft classification? Large-margin unified machines." J Am Stat Assoc. 2011;106(493):166-177. PubMed
Lu X, Tsiatis AA. "Semiparametric estimation of treatment effect with time-lagged response in the presence of informative censoring." Lifetime Data Anal. 2011;17(4):566-93. PubMed
Ma S, Kosorok MR, Huang J, Dai Y. "Incorporating higher-order representative features improves prediction in network-based cancer prognosis analysis." BMC Med Genomics. 2011;4:5. PubMed
May RC, Ibrahim JG, Chu H. "Maximum likelihood estimation in generalized linear models with multiple covariates subject to detection limits." Stat Med. 2011;30(20):2551-61. PubMed
Michiels S, Potthoff RF, George SL. "Multiple testing of treatment-effect-modifying biomarkers in a randomized clinical trial with a survival endpoint." Stat Med. 2011;30(13):1502-18. PubMed
Mitha F, Herodotou H, Borisov N, Jiang C, Yoder J, Owzar K. "SNPpy--database management for SNP data from genome wide association studies." PLoS One. 2011;6(10):e24982. PubMed
Nadkarni NV, Zhao Y, Kosorok MR. "Inverse regression estimation for censored data." J Am Stat Assoc. 2011;106(493):178-190. PubMed
Owzar K, Barry WT, Jung SH. "Statistical considerations for analysis of microarray experiments." Clin Transl Sci. 2011;4(6):466-77. PubMed
Pang H, Hauser M, Minvielle S. "Pathway-based identification of SNPs predictive of survival." Eur J Hum Genet. 2011;19(6):704-9. PubMed
Pongpanich M, Neely ML, Tzeng JY. "On the aggregation of multimarker information for marker-set and sequencing data analysis: Genotype collapsing vs. similarity collapsing." Front Genet. 2011;2:110. PubMed
Reich BJ, Bondell HD. "A spatial dirichlet process mixture model for clustering population genetics data." Biometrics. 2011;67(2):381-90. PubMed
Reich BJ, Bondell HD, Li L. "Sufficient dimension reduction via bayesian mixture modeling." Biometrics. 2011;67(3):886-95. PubMed
Genome-wide association study identifies five new schizophrenia loci." Nat Genet. 2011;43(10):969-76. PubMed
Skup M, Zhu H, Wang Y, Giovanello KS, Lin Jan, Shen D, Shi F, Gao W, Lin W, Fan Y, Zhang H. "Sex differences in grey matter atrophy patterns among AD and aMCI patients: results from ADNI." Neuroimage. 2011;56(3):890-906. PubMed
Sohn I, Owzar K, Lim J, George SL, Cushman SMackey, Jung SH. "Multiple testing for gene sets from microarray experiments." BMC Bioinformatics. 2011;12:209. PubMed
Storlie CB, Bondell HD, Reich BJ, Zhang HHelen. "Surface estimation, variable selection, and the nonparametric oracle property." Stat Sin. 2011;21(2):679-705. PubMed
Tamura RN, Huang X, Boos DD. "Estimation of treatment effect for the sequential parallel design." Stat Med. 2011;30(30):3496-506. PubMed
Thomas L, Stefanski L, Davidian M. "A moment-adjusted imputation method for measurement error models." Biometrics. 2011;67(4):1461-70. PubMed
Tsiatis AA, Davidian M. "Discussion of "Connections between survey calibration estimators and semiparametric models for incomplete data" by T. Lumley, P.A. Shaw & J.Y. Dai." Int Stat Rev. 2011;79(2):221-223. PubMed
Tsiatis AA, Davidian M, Cao W. "Improved doubly robust estimation when data are monotonely coarsened, with application to longitudinal studies with dropout." Biometrics. 2011;67(2):536-45. PubMed
Tzeng JY, Zhang D, Pongpanich M, Smith C, McCarthy MI, Sale MM, Worrall BB, Hsu FC, Thomas DC, Sullivan PF. "Studying gene and gene-environment effects of uncommon and common variants on continuous traits: a marker-set approach using gene-trait similarity regression." Am J Hum Genet. 2011;89(2):277-88. PubMed
Walter V, Nobel AB, Wright FA. "DiNAMIC: A method to identify recurrent DNA copy number aberrations in tumors." Bioinformatics. 2011;27(5):678-85. PubMed
Zeng D, Schaubel DE, Cai J. "Semiparametric transformation rate model for recurrent event data." Stat Biosci. 2011;3(2):187-207. PubMed
Zhang M, Tsiatis AA, Davidian M, Pieper KS, Mahaffey KW. "Inference on treatment effects from a randomized clinical trial in the presence of premature treatment discontinuation: the SYNERGY trial." Biostatistics. 2011;12(2):258-69. PubMed
Zhang HHelen, Cheng G, Liu Y. "Linear or nonlinear? Automatic structure discovery for partially linear models." J Am Stat Assoc. 2011;106(495):1099-1112. PubMed
Zhao Y, Zeng D, Socinski MA, Kosorok MR. "Reinforcement learning strategies for clinical trials in nonsmall cell lung cancer." Biometrics. 2011;67(4):1422-33. PubMed
Zhou H, Wu Y, Liu Y, Cai J. "Semiparametric inference for a 2-stage outcome-auxiliary-dependent sampling design with continuous outcome." Biostatistics. 2011;12(3):521-34. PubMed
Zhu H, Ibrahim JG, Tang N. "Bayesian influence analysis: A geometric approach." Biometrika. 2011;98(2):307-323. PubMed
Zhu H, Kong L, Li R, Styner M, Gerig G, Lin W, Gilmore JH. "FADTTS: Functional analysis of diffusion tensor tract statistics." Neuroimage. 2011;56(3):1412-25. PubMed
2010
Bondell HD, Reich BJ, Wang H. "Noncrossing quantile regression curve estimation." Biometrika. 2010;97(4):825-838. PubMed
Chen Y, Ji S, Wu X, An H, Zhu H, Shen D, Lin W. "Simulation of brain mass effect with an arbitrary Lagrangian and Eulerian FEM." Med Image Comput Comput Assist Interv. 2010;13(Pt 2):274-81. PubMed
Chu H, Guo H, Zhou Y. "Bivariate random effects meta-analysis of diagnostic studies using generalized linear mixed models." Med Decis Making. 2010;30(4):499-508. PubMed
Gao W, Zhu H, Giovanello K, Lin W. "Multivariate network-level approach to detect interactions between large-scale functional systems." Med Image Comput Comput Assist Interv. 2010;13(Pt 2):298-305. PubMed
George SL. "Design of phase III clinical trials. 2010.
Han X, Li Y, Huang J, Zhang Y, Holford T, Lan Q, Rothman N, Zheng T, Kosorok MR, Ma S. "Identification of predictive pathways for non-hodgkin lymphoma prognosis." Cancer Inform. 2010;9:281-92. PubMed
Hu YJ, Lin DY, Zeng D. "A general framework for studying genetic effects and gene-environment interactions with missing data." Biostatistics. 2010;11(4):583-98. PubMed
Hu YJ, Lin DY. "Analysis of untyped SNPs: Maximum likelihood and imputation methods." Genet Epidemiol. 2010;34(8):803-15. PubMed
Ibrahim JG, Chu H, Chen LM. "Basic concepts and methods for joint models of longitudinal and survival data." J Clin Oncol. 2010;28(16):2796-801. PubMed
Koehler ML, Bondell HD, Tzeng JY. "Evaluating haplotype effects in case-control studies via penalized-likelihood approaches: Prospective or retrospective analysis?" Genet Epidemiol. 2010;34(8):892-911. PubMed
Li J, Fine JP. "Weighted area under the receiver operating characteristic curve and its application to gene selection. 2010.
Li J, Fine JP. "Weighted area under the receiver operating characteristic curve and Its application to gene selection." J R Stat Soc Ser C Appl Stat. 2010;59(4):673-692. PubMed
Lin DY, Zeng D. "Meta-analysis of genome-wide association studies: No efficiency gain in using individual participant data." Genet Epidemiol. 2010;34(1):60-6. PubMed
Lin DY, Zeng D. "On the relative efficiency of using summary statistics versus individual-level data in meta-analysis." Biometrika. 2010;97(2):321-332. PubMed
Liu Y, Wu Y, He Q. "Utility-based weighted multicategory robust support vector machines." Stat Interface. 2010;3(4):465-476. PubMed
Pang H, Ebisu K, Watanabe E, Sue LY, Tong T. "Analysing breast cancer microarrays from African Americans using shrinkage-based discriminant analysis." Hum Genomics. 2010;5(1):5-16. PubMed
Sargent DJ, George SL. "Clinical trials data collection: When less is more." J Clin Oncol. 2010;28(34):5019-21. PubMed
Shterev ID, Jung SH, George SL, Owzar K. "permGPU: Using graphics processing units in RNA microarray association studies." BMC Bioinformatics. 2010;11:329. PubMed
Sohn I, Owzar K, George SL, Kim S, Jung SH. "Robust test method for time-course microarray experiments." BMC Bioinformatics. 2010;11:391. PubMed
Todem D, Fine J, Peng L. "A global sensitivity test for evaluating statistical hypotheses with nonidentifiable models." Biometrics. 2010;66(2):558-66. PubMed
Todem D, Kim K, Fine J, Peng L. "Semiparametric regression models and sensitivity analysis of longitudinal data with nonrandom dropouts." Stat Neerl. 2010;64(2):133-156. PubMed
Zhang X, Huang S, Zou F, Wang W. "TEAM: Efficient two-locus epistasis tests in human genome-wide association study." Bioinformatics. 2010;26(12):i217-27. PubMed
Zhu H, Styner M, Li Y, Kong L, Shi Y, Lin W, Coe C, Gilmore JH. "Multivariate varying coefficient models for DTI tract statistics." Med Image Comput Comput Assist Interv. 2010;13(Pt 1):690-7. PubMed